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Small RNA Kits

Analysis of small RNA quality control including microRNA quantification.

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The Agilent Small RNA kit focuses on quality control of microRNA (miRNA) and small RNA. Analysis of small RNA is essential for downstream applications such as small RNA next-generation sequencing (NGS) libraries. The Agilent Small RNA ladder includes seven fragments ranging from 15 to 200 nt, providing quantification and sizing of small RNA and miRNA. Focusing on a narrow range of 200 nt magnifies the individual areas of miRNA (10 to 40 nt) and small RNA (40 to 200 nt), allowing for high separation resolution and detailed analysis of each region.
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ProteoAnalyzer Software Security Module

ProteoAnalyzer Security Module is designed to meet compliance requirements of FDA 21 CFR Part 11, EU Annex 11, and GxP laboratories

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The ProteoAnalyzer software security module is designed for laboratories that must comply with the guidelines of FDA 21 CFR Part 11, EU Annex 11, GxP, and similar national electronic record regulations. |This software module provides system access controls, ensures traceability through audit trails, and streamlines approval workflows with integrated eSignature functionality.|The ProteoAnalyzer software security module operates autonomously as a standalone package, consisting of the Administration Software for system configuration and access control, ProteoAnalyzer controller for instrument communication and data acquisition, and ProSize data analysis software for high-resolution data processing and interpretation.
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RNA Kits

Analysis of mRNA and total RNA quality control, detecting critical quality attributes of IVT mRNA such as size, purity, and integrity.

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Agilent RNA kits are used for the automated quality control analysis of mRNA and total RNA, including formalin-fixed, paraffin-embedded (FFPE) RNA quality assessment and in vitro transcribed (IVT) mRNA sizing, purity, and integrity measurement. Quality RNA is crucial to many applications, including mRNA vaccine development, qPCR, NGS, microarray analysis, and northern blot analysis.|Agilent ProSize data analysis software calculates an RNA quality number (RQN), providing a quantitative total RNA quality metric for downstream applications. Excellent resolution allows users to easily distinguish between RNA degradation and small RNA.
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Ultra Sensitivity NGS Kit

NGS library quality control for low concentration NGS libraries and DNA smears, including cfDNA

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The Ultra Sensitivity NGS kit for the Femto Pulse system is used for NGS library quality control, providing sizing and quantification for DNA smears and fragments into the femtogram range. Detecting DNA smears as low as 5 pg/µL and quantifying up to 250 pg/µL makes the Ultra Sensitivity NGS kit ideal for quality control of low concentration NGS libraries. Other genomics applications include single-cell sequencing library QC, PCR-free NGS libraries, and cfDNA quality analysis.
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Data Sheets
Agilent ProSize Data Analysis Software For the Agilent Fragment Analyzer, Femto Pulse and ZAG DNA Analyzer Parallel Electrophoresis Systems (PDF)

This data sheet describes the features, benefits and specifications of the Agilent ProSize software for Agilent Fragment Analyzer, Femto Pulse and ZAG DNA Analyzer

  • Publication Part Number: 5994-3806EN
  • Created: 01 Jan 2025
  • 364 KB
  • PDF
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User Manuals
ProSize Data Analysis Software User Manual for Protein (PDF)

This manual is a technical reference for the ProSize data analysis software for use with ProteoAnalyzer parallel electrophoresis systems. This document includes software system requirements, installation procedures, software operation,...

  • Publication Part Number: D0033432 Rev. B
  • Created: 01 Nov 2023
  • 5 MB
  • PDF
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Data Sheets
Agilent Fragment Analyzer and ProSize Data Analysis Software (PDF)

This datasheet describes the roles and permissions in the enhanced security mode for the Agilent Fragment Analyzer systems.

  • Publication Part Number: 5994-5354EN
  • Created: 16 Mar 2023
  • 183 KB
  • PDF
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User Manuals
How to add how-to vidoes to ProSize data analysis software (PDF)

This document describes how to add the tutorial videos to the ProSize data analysis software.

  • Created: 08 Sep 2021
  • 326 KB
  • PDF
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Data Sheets
Agilent Fragment Analyzer Security Module, Fragment analyzer controller rev. 5.0.0, ProSize data analysis software rev 6.0.0 (PDF)

The Fragment Analyzer security module software package supports using the Agilent Fragment Analyzer systems in regulated laboratory environments.

  • Publication Part Number: 5994-7631EN
  • Created: 10 Feb 2025
  • 188 KB
  • PDF
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Data Sheets
Enhanced Security Features of Fragment Analyzer Controller and ProSize Data Analysis Software (PDF)

This datasheet describes the enhanced security mode for the Agilent Fragment Analyzer controller and ProSize data analysis software.

  • Publication Part Number: 5994-5037EN
  • Created: 08 Feb 2023
  • 305 KB
  • PDF
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Case Studies
ProteoAnalyzer Controller Software Rev. 2.0.0 and ProSize Data Analysis Software Rev. 6.0.1 (PDF)

This white paper is a resource for users of Agilent ProteoAnalyzer system whose organizations must comply with US FDA Part 11 in Title 21 and Eudralex Chapter 4, Annex 11 regulations.

  • Publication Part Number: 5994-8836EN
  • Created: 09 Dec 2025
  • 405 KB
  • PDF
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Qualitative DNA Kits

DNA fragment analysis for PCR, genotyping, and microsatellite applications.

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The qualitative kits provide automated and accurate sizing with relative quantification of DNA fragments. Common uses include the analysis of PCR amplicons, simple sequence repeats (SSRs)/microsatellites, and genotyping. There are six different kits to choose from, based on the size of the DNA or PCR fragments, ranging from 35 to 20,000 bp. Specially formulated gels, markers, and ladders are designed for each kit, enabling reliable sizing over a broad range with varying applications. High resolution kits enable the separation of fragments under 300 bp with a 3 bp difference.
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ZAG DNA Analyzer System

Parallel capillary electrophoresis system for automated high-throughput DNA fragment analysis

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The Agilent ZAG DNA Analyzer system relieves bottlenecks in automated high-throughput DNA fragment analysis workflows. Using parallel capillary electrophoresis, the ZAG DNA Analyzer system can process thousands of DNA fragment samples a day, eliminating bottlenecks associated with agarose gels.|This system is ideal for a range of DNA fragment applications, from basic PCR fragment analysis to microsatellite detection. Minimal sample preparation, automated separation of samples, and the option for continuous operation help keep your workflow moving.
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User Manuals
ZAG DNA Analyzer system manual (PDF)

This document includes system overviews, analytical methods, maintenance procedures, software operation, troubleshooting guide, and instrument shutdown procedures.

  • Publication Part Number: D0002113
  • Created: 02 June 2025
  • 5 MB
  • PDF
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Applications
Detection and Analysis of Restriction-Digested Plasmid Fragments (PDF)

To demonstrate the efficiency and accuracy of DNA insert assessment in cloning vectors, the ZAG system was utilized to identify the presence or absence of an insert in two different plasmids.

  • Publication Part Number: 5994-2919EN
  • Created: 11 Dec 2020
  • 511 KB
  • PDF
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Applications
Genomic DNA Handling and the Agilent Femto Pulse System (PDF)

This application note explores the impact that different handling protocols can have on gDNA sample integrity and provides recommendations for best practices when performing analysis with the Femto Pulse.

  • Publication Part Number: 5994-2723EN
  • Created: 15 Nov 2020
  • 1 MB
  • PDF
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User Manuals
Agilent Security Module Software user manual (PDF)

This document includes the introduction, installation, initial tasks, reocurring tasks, and other administrative elements of the Fragment Analyzer and ProteoAnalyzer Security Module Software.

  • Created: 04 July 2025
  • 1 MB
  • PDF
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User Manuals
Agilent Administration software Readme (PDF)

This document lists changes of Agilent Administration software revision 1.0.0, lists system requirements and provides installation instructions.

  • Created: 28 Apr 2025
  • 195 KB
  • PDF
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Brochures
Dependable Denaturing Protein Electrophoresis Agilent ProteoAnalyzer system (PDF)

This brochure describes the ProteoAnalyzer system that streamlines separations of proteins from 10 to 240 kDa, including challenging samples, with automated parallel capillary electrophoresis.

  • Publication Part Number: 5994-6716EN
  • Created: 01 July 2024
  • 3 MB
  • PDF
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Applications
Best Sizing Practices with the Agilent 5200 Fragment Analyzer System (PDF)

The Agilent 5200 Fragment Analyzer system provides reliable sizing for fragments and smears for many nucleic acid applications

  • Publication Part Number: 5994-0585EN
  • Created: 19 Jan 2024
  • 797 KB
  • PDF

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